ARTICLES (A), CONFERENCE PROCEEDINGS/PRESENTATIONS (C), PREPRINTS (PP) AND SUBMITTED MANUSCRIPTS (S)
C30. S. Naz, VE Effanga, X. Zhao, A. Abdossova, DM Kalyon, C. Erisken*. Scaffolds fabricated using different techniques resemble the structural and compositional properties of osteochondral tissues from different species. TERMIS Annual Conference 15-18 November 2026, New Orleans, LA, USA.

S4. Syed Muhammad Razi Kazim Naqvi, Aruzhan Askarkyzy, Igor S. Aronson, Dina Saginova, Cevat Erisken*. Organ-on-Chip Technologies for Disease Modeling and Regenerative Medicine of Osteochondral Interface. To be submitted (Scopus xx%) 2026, Manuscript No xxxxx.

S3. Swera Naz, Syed Muhammad Razi Kazim Naqvi, Ulpan Nurmanova, Abdullateef Gbolahan Olayiwola, Yuliya Safarova, Ferdinand Molnar, Cevat Erisken*. Biomaterials for ACL Regeneration: From Fiber-Based Scaffolds to Lab-on-Chip Models. Bio-Design and Manufacturing (Scopus 94%) 2026, Manuscript No BDMJ-S-26-00387, Submitted.

S2. Yuze Zhang, Aneri Patel, Mohammad Mir, Bilge D. Kalyon, Cevat Erisken, Jinho Kim and Dilhan M. Kalyon*. An Injectable and Biocompatible Lung-Mimetic Sealant: Shear-History-Controlled Gelation and Viscoelasticity Guided by Machine Learning. Biomedical Materials and Devices (Scopus 89%) 2026, Manuscript No df627e7b-3e37-4624-ae8e-4489631f1cb8, Under Peer Review.

C29. S. Naz, VE Effanga, X. Zhao, A. Abdossova, DM Kalyon, C. Erisken*. Structural and compositional properties of osteochondral tissues from bovine, pig and rabbit and biomimetic scaffolds fabricated using different techniques. 34. Annual Meeting of EORS 23-25 September 2026, Madrid, Spain.

S1. Raiymbek Nurtay, Cevat Erisken, Adnan Yazici. AI-Driven Clinical Decision Support for Heart Disease Risk Prediction Using Ensemble Machine Learning Models. The Journal of Supercomputing (Scopus 81%) 2025, Submission ID b9d4e32d-fd16-424a-8969-6d1f2c2a80d6, Submitted.

2026
A37. Yandai Lin, Yu Shi, Fengqi Xuan, Albina Abdossova, Cevat Erisken, Zhe Liu. Engineered MOF-5-based Nanocomposites for Advanced Tumor Combinational Therapy by Ultrasound/Laser Actuation: A Comparison on Anti-tumor Elucidations. Materials Chemistry Frontiers (Scopus 89%) 2026, In Press, DOI: https://doi.org/10.1039/D6QM00253F.

A36. Albina Abdossova, Toheeb Olalekan Oladejo, Sabira Seipetdenova, Marzhan Nurlankyzy, Aigerim Omirzakova, Aidana Bissen, Aliya Bekmurzayeva, Carlo Molardi, Cevat Erisken, Wilfried Blanc, Daniele Tosi *. Surface-Modified Extrinsic Semi-Distributed Interferometers for Fiber-Optic Refractive Index Detection and Biosensing. Biosensors (Scopus 96%) 2026, 16(5) 286; doi: 10.3390/bios16050286.

A35. Abdullateef Gbolahan Olayiwola, Albina Abdossova, Daniele Tosi, Gorka Orive, Zhe Liu, Cevat Erisken*. State-of-the-Art and Next Generation Intra-Articular Implantable Biosensors for Osteoarthritis: From Analytical Limits to Operational Stability. Biosensors (Scopus 96%) 2026, 16(5) 283; https://doi.org/10.3390/bios16050283.

C28. Xiao Zhao, Xiaojun Yu, Dilhan M. Kalyon, Albina Abdossova, Swera Naz, Cevat Erisken. Bioextrusion of Hydrogel/Mineral Composites to Create Gradients for Osteochondral (Bone-Cartilage) Interface. NU SEDS 2nd Annual Research Conference 9-10 April 2026, Astana, Kazakhstan.

A34. Xiao Zhao, Xiaojun Yu, Swera Naz, Agila Zhussupova, Dilhan M Kalyon*, Cevat Erisken*. Microgradients in porosity and canal diameter in femur bone and its implications for bone repair and regeneration. Front. Bioeng. Biotechnol. 2026, 14:1789149.
DOI: 10.3389/fbioe.2026.1789149. (Scopus 94%)

A33. Sanazar Kadyr, Bakhytbol Khumyrzakh, Swera Naz, Albina Abdossova, Bota Askarbek, Dilhan M Kalyon, Zhe Liu, Cevat Erisken *. Functional hydrogels for osteochondral interface regeneration: Biomaterial types, processes, and animal models 2026, Gels 12(1), 24; https://doi.org/10.3390/gels12010024 (Scopus 89%)

A32. Zhao X, Wang W, Yu X, Kalyon DM*, Erisken C*. Bioextrusion of Hydrogels with Controlled Mineral Gradients for Regenerative Engineering of the Osteochondral Interface. Bio-Design and Manufacturing 2026, 9(1), 122–136; https://link.springer.com/article/10.1631/bdm.2500291 (Scopus 94%)

PP4. Yuze Zhang, Aneri Patel, Mohammad Mir, Bilge D. Kalyon, Cevat Erisken, Jinho Kim and Dilhan M. Kalyon*. Tunable Gelation and Viscoelasticity of Lung-Tissue–Mimetic Sealant: Linking Shear History to In Situ Mechanical Performance through Physics-Informed Machine Learning. ChemRxiv Materials Science 2026. DOI: 10.26434/chemrxiv-2026-zkrvp.

2025
A31. Seitzhaparova B, Timur L, Mirasbek B, Kadyr S, Lesbekov T, Zhakypbekova A, Erisken C*. Rabbit Heart Bioartificial Tissue: Perfusion Decellularization and Characterization. Biomed. Physics Eng. Express 2025 , 11 015033. DOI: 10.1088/2057-1976/ad99de. (Scopus 56%)

PP3. Xiao Zhao, Xiaojun Yu, Swera Naz, Agila Zhussupova, Dilhan M Kalyon*, Cevat Erisken*. Microgradients in porosity and canal diameter in femur bone. BioRxiv Bioengineering 2025. https://doi.org/10.64898/2025.12.17.695028.

C27. X. Zhao, X. Yu, D. M. Kalyon, A. Abdossova, S. Naz, C. Erisken*. Advanced Bioprinting of Hydrogels with Controlled Mineral Gradients for Osteochondral interface. Tissue Engineering Part A 2025, 31 (23-24), e1355 DOI: 10.1177/19373341251385379. (Scopus 78%)
This paper was presented at TERMIS Annual Conference 9-12 November 2025, Detroit, MI, USA.
2024
A30. Effanga VE, Akilbekova D, Mukasheva F, Zhao X, Kalyon D, Erisken C*. In vitro investigation of 3D printed hydrogel scaffolds with electrospun tidemark component for modeling the osteochondral interface. Gels, 2024, 10 745. https://doi.org/10.3390/gels10110745. (Scopus 81%)

A29. Kadyr S, Nurmanova U, Khumyrzakh B, Zhakypbekova A, Saginova D, Daniyeva N, Erisken C*. Braided biomimetic PCL grafts for anterior cruciate ligament reconstruction. Biomedical Materials (Bristol), 2024, 19 025034. DOI: 10.1088/1748-605X/AD2555. (Scopus 67%)

A28. Mukasheva F, Zhanbassynova A, Erisken C*. Biomimetic grafts from ultrafine fibers for collagenous tissues. Bio-Medical Materials and Engineering 2024, 35: 323–335. DOI: 10.3233/BME-230193.

PP2. Kadyr S, Khumyrzakh B, Erisken C*. Bibliometric Review of Osteochondral Interface Regeneration. Preprints 2024. DOI: 10.20944/preprints202411.2287.v1

PP1. Xiao Zhao; Weiwei Wang; Xiaojun Yu; Dilhan M Kalyon; Cevat Erisken. Advanced Bioprinting of Hydrogels with Controlled Mineral Gradients for Regenerative Engineering of the Osteochondral Interface. BioRxiv Bioengineering 2024. DOI: 10.1101/2024.11.25.625326

2023
A27. Yildirim N, Amanzhanova A, Kulzhanova G, Mukasheva F, Erisken C*. Osteochondral interface: Regenerative engineering and challenges. ACS Biomater. Sci. Eng. 2023, 9, 3, 1205–1223. DOI: 10.1021/acsbiomaterials.2c01321.

A26. Smatov S, Mukasheva F, Erisken C*. Collagen fibril diameter distribution of sheep Anterior Cruciate Ligament. Polymers, 2023, 15(3):752. DOI: 10.3390/polym15030752.

C26. Kadyr S, Adeoye A, Smatov S, Zhakypbekova A, Erisken C*. Biomimetic Fiber-based Models For Anterior Cruciate Ligament Regeneration. Proceeding published in Tissue Engineering Part A, 2023, 29(9-10).

C25. Beisbayeva Zhyuldyz, Smail Smatov, Abass Ojo Adeoye, Sanazar Kadyr, Ulpan Nurmanova, Baisunkar Mirasbek, Cevat Erisken. Creation and characterization of biomimetic fiber-based models for functional anterior cruciate ligament regeneration. 9th International Conference on Mechanics of Biomaterials and Tissues (ICMOBT), 16-20 December 2023, Waikoloa Beach, HI.

C24. Sanazar Kadyr, Abass Ojo Adeoye, Smail Smatov, Aida Zhakypbekova, Cevat Erisken. Biomimetic Fiber-based Models For Anterior Cruciate Ligament Regeneration. TERMIS Americas 2023 Annual Conference, 11-14 April 2023, Boston, MA.

2012-2022
A25. Adeoye AO, Mukasheva F, Smatov S, Khumyrzakh B, Kadyr S, Shulgau Z and Erisken C. A biomimetic synthetic nanofiber-based model for anterior cruciate ligament regeneration. Front. Bioeng. Biotechnol., 2022, 10:969282. DOI: 10.3389/fbioe.2022.969282.

A24. Beisbayeva Z, Zhanbassynova A, Kulzhanova G, Mukasheva F, Erisken C*. Change in collagen fibril diameter distribution of bovine Anterior Cruciate Ligament upon injury can be replicated in a nanostructured scaffold. Molecules, 2021, 26(5): 1204. DOI: 10.3390/molecules26051204.

A23. Cevat Erisken, Andrew Tsiantis, Thanasis Papathansiou, Evangelos Karvelas*. Collagen fibril diameter distribution affects permeability of ligament tissue: A computational study on healthy and injured tissues. Computer Methods and Programs in Biomedicine, 2020 (196): 105554. DOI: 10.1016/j.cmpb.2020.105554

C23. Beisbayeva Z, Zhanbassynova A, Kulzhanova G, Daniyeva N, Erisken C. Collagen fibril diameter distribution of bovine Anterior Cruciate Ligament changes from bimodal to unimodal upon injury with subsequent decrease in mean diameter. 8th International Conference on Mechanics of Biomaterials and Tissues, 15-19 December 2019, Hawaii, US.

C22. Ozlu B, Ergin M, Budak S, Tunali S, Yildirim N, Erisken C. A Bioartificial Rat Heart Tissue: Perfusion Decellularization and Characterization, TERMIS EU 2019: Tissue Engineering Therapies: From Concept to Clinical Translation and Commercialization, May 27-31 2019, Rhodes, Greece. Proceeding published in eCM Periodical, 2019, Collection 3.

C21. Velioglu ZB, Pulat D, Demirbakan B, Ozcan B, Bayrak E, Erisken C. Human Bone Marrow Stem Cell Behavior on 3D Printed Scaffolds as Trabecular Bone Grafts, ICBBM 2019 : International Conference on Biomaterials and Bioinspired Materials, March 21-22 2019, Dubai, UAE. Proceeding published in International Journal of Biomedical and Biological Engineering, 13 (3) 2019.

C20. Arda KN, Akay S, Erisken C. Gadolinium-based contrast agents could lead to local temperature changes under magnetic field, European Congress of Radiology, February 27 – March 3 2019, Vienna, Austria.

A22. Ozlu B, Ergin M, Budak S, Tunali S, Yildirim N, Erisken C^*. A Bioartificial Rat Heart Tissue: Perfusion Decellularization and Characterization. The International Journal of Artificial Organs, 2019, 42 (12), 757-764. DOI: 10.1177/0391398819863434

A21. Arda NY, Akay S, Erisken C*. Effect of gadolinium concentration on temperature change under magnetic field. PLOS ONE, 2019, 14(4):e0214910. DOI: 10.1371/journal.pone.0214910.

A20. Velioglu ZB, Pulat D, Demirbakan B, Ozcan B, Bayrak E, Erisken C*. 3D Printed poly(lactic acid) scaffolds for trabecular bone repair and regeneration: scaffold and native bone characterization. Connective Tissue Research, 2019, 60(3):274-282. DOI: 10.1080/03008207.2018.1499732

A19. Erisken C*, Aksel H. Functional scaffolds for dental pulp regeneration. Turkiye Klinikleri J Endod-Special Topics 2018;4(1):19-26.

C19. Bayrak E, Özcan B, Erisken C. Human Bone Marrow Stem Cell Behavior on Biomimetic Nanofiber Composites for Tendon-Bone Interface Regeneration, Cell and Stem Cell Research, March 19-21 2018, New York, NY. Proceeding published in Journal of Cell Science and Therapy (9) p 86, 2018.

C18. Erisken C. (Invited Speaker) Interdisciplinary Education in Advanced Technologies, 2nd International Academic Congress, October 18-21 2017, Alanya, Antalya, TR.

A18. Lee NM, Erisken C, Iskratsch T, Sheetz M, Levine WN, Lu HH*. Polymer fiber-based models of connective tissue repair and healing. Biomaterials 2017, 112: 303-312. doi: 10.1016/ j.biomaterials.2016.10.013.

A17. Gurlek A, Sevinc B, Bayrak E, Erisken C*. Synthesis and characterization of polycaprolactone for Anterior Cruciate Ligament regeneration. Materials Science & Engineering C: Materials for Biological Applications, 2017, 71:820-826. doi:10.1016/j.msec.2016.10.071.

A16. Bayrak E, Ozcan B, Erisken C*. Processing of polycaprolactone and hydroxyapatite to fabricate graded electrospun composites for tendon-bone interface regeneration. Journal of Polymer Engineering, 2017, 37(1): 99–106. doi: 10.1515/polyeng-2016-0017

A15. Bayrak E, Ozcan B, Erisken C*. Cartilage-bone interface features, scaffold and cell options for regeneration. Journal of Tissue Science and Engineering 2016, 7:174. doi:10.4172/2157-7552.1000174.

C17. Bayrak E, Ozcan B, Erisken C. Functionally Graded Composites for Tendon-Bone Tissue Interface Regeneration, 1st International Academic Congress, November 3-5 2016, Side, Antalya, TR.

C16. Özcan B, Kalyon DM , Zhou J, Kim SG, Mao JJ, Erisken C. Viscoelastic Properties of Dental Pulp Tissue for Biomaterial Development, ASME NanoEngineering for Medicine and Biology Conference, February 21 - 24 2016, Houston, TX.

C15. Bayrak E, Özcan B, Erisken C. Processing of polycaprolactone and hydroxyapatite to fabricate graded electrospun composites for tendon-bone interface regeneration, ASME NanoEngineering for Medicine and Biology Conference, February 21 - 24 2016, Houston, TX

A14. Aksel H*, Serper A, Kalayci S, Somer G, Erisken C. Effects of QMix and ethylenediaminetetraacetic acid on decalcification and erosion of root canal dentin. Microsc Res Tech. 2016, 79(11):1056-1061. doi: 10.1002/jemt.22745.

A13. Ozcan B, Bayrak E, Erisken C*. Characterization of human dental pulp tissue under oscillatory shear and compression. Journal of Biomechanical Engineering 2016, 138:061006. doi: 10.1115/1.4033437

A12. Erisken C*, Kalyon DM, Zhou J, Kim SG, Mao JJ. Viscoelastic properties of dental pulp tissue and ramifications on biomaterial development for pulp regeneration. Journal of Endodontics 2015, 41(10): 1711-1717

A11. Lee CH, Rodeo SA, Fortier LA, Lu C, Erisken C and Mao JJ*. Protein-releasing polymeric scaffolds induce fibrochondrocytic differentiation of endogenous cells for knee meniscus regeneration in sheep. Science Translational Medicine 2014, 6(266): 266ra171.

A10. Kalyon DM*, Erisken C, Ozkan S, Ergun-Butros A, Yu X, Wang H, Valdevit A, Ritter A. Functionally-graded polymeric graft substitutes and scaffolds for tissue engineering can be fabricated via various extrusion methods. Editorial Article. Journal of Tissue Science and Engineering 2014, 5:1.

C14. Lee NM, Erisken C, Lu HH. Effect of randomly aligned scaffold fiber diameter on human tendon fibroblast response, Society for Biomaterials Proceedings, 2013, Boston, MA.

A9. Erisken C, Zhang X, Moffat KL, Levine WN, Lu HH*. Scaffold fiber diameter regulates human tendon fibroblast growth and differentiation. Tissue Engineering Part A 2013, 19(3-4): 519-528.

A8. Senturk-Ozer S, Gevgilili H, Erisken C, Ward D, Kalyon DM*. Nanofibrous meshes by advanced electrospinning. Society of Plastics Engineers Plastics Research Online 2013, 4685:1-4.

A7. Zhang X, Bogdanowicz D, Erisken C, Lee NM, Lu HH*. Biomimetic scaffold design for functional and integrative tendon repair. Journal of Shoulder and Elbow Surgery 2012, 21: 266-277.

C13. Kalyon D, Ergun-Butros A, Ozkan S, Erisken C. Extrusion based processes for fabrication of bioresorbable scaffolds for tissue engineering applications, Proceedings of Polymer Processing Society, May 2012: 268-269.

C12. D. M. Kalyon, A. Ergun, S. Ozkan, C. Erisken, E. Elgin, H. Gevgilili, X. Yu, H. Wang, A. Ritter and A. Valdevit. Novel methods of fabrication of scaffolds for tissue engineering, NY Academy of Sciences, Chemical Engineering Approaches to Challenges in Energy and Biomedicine Meeting, March 30, 2012, New York, NY.

Before 2011
A6. Erisken C, Kalyon D*, Wang H, Ornek C, Xu J. Osteochondral tissue formation through adipose-derived stromal cell differentiation on biomimetic polycaprolactone nanofibrous scaffolds with graded insulin and beta-glycerophosphate concentrations. Tissue Engineering Part A 2011, 17(9-10): 1239-1252.

C11. Erisken C, Villain A, Zhang X, Lee, NM, Lu HH. Modeling of release of bioactive molecules from nanofiber meshes, Biomedical Engineering Society Annual Meeting, October 12-15 2011, Hartford, Connecticut.

C10. Kalyon DM, Ergun A, Ozkan S, Erisken C. Novel graded scaffolds, methods of fabrication and applications for bone tissue engineering, ACS Meeting Macromex December 7-11 2011, Cancun, Mexico.

C9. Erisken C, Zhang X, Lu HH. Controlled Release of TGF-b3 from nanofibers, its stability and bioactivity against chondrocytes, Transactions of the 57th Annual Meeting of the Orthopaedic Research Society, January 13 – 16 2011, Long Beach, California.

C8. Erisken C, Zhang X, Moffat KL, Levine WN, Lu HH. Scaffold fiber diameter modulates human tendon fibroblast growth and differentiation, Transactions of the 57th Annual Meeting of the Orthopaedic Research Society, January 13 – 16 2011, Long Beach, California.

C7. Subramony S, Delos D, Weber A, Erisken C, Boushell M, Zhou B, Guo XE, Deng X, Rodeo S and Lu HH; “In vivo evaluation of a mechanoactive nanofiber scaffold for integrative ACL reconstruction”, Transactions of the 57th Annual Meeting of the Orthopaedic Research Society, January 13 – 16 2011, Long Beach, California.

A5. Erisken C, Kalyon D*, Wang H. Viscoelastic and biomechanical properties of osteochondral tissue constructs generated from graded polycaprolactone and beta-tricalcium phosphate composites. Journal of Biomechanical Engineering 2010, 132(9):091013.
C6. Lu HH, Erisken C. Engineering tissue-tissue interfaces via controlled scaffold design, Controlled Release Society Annual Meeting, July 10-14 2010, Portland, Oregon. (Invited Lecture)

C5. Subramony SD, Tracey MS, Erisken C, Elasmai MY, Lu HH. Anterior cruciate ligament fibroblast response to changes in polymer nanofiber scaffold composition. Proceedings of IEEE Northeast Bioengineering Conference, New York, NY, 2010 pp. 1-2, doi: 10.1109/NEBC.2010.54581492010.

C4. Erisken C, Xin Z, Moffat KL, Levine WN, Lu HH. Effect of scaffold fiber diameter on human tendon fibroblast response, Society for Biomaterials Proceedings, 21-24 April 2010, Seattle, WA.

C3. Subramony S, Tracey M, Erisken C, Lu HH. Effect of scaffold elasticity on ligament fibroblast response, Society for Biomaterials Proceedings, 21-24 April 2010, Seattle, WA.

A4. Erisken C, Kalyon D*, Wang H. Functionally graded electrospun polycaprolactone and beta-tricalcium phosphate nanocomposites for tissue engineering applications. Biomaterials 2008, 29: 4065-4073.

A3. Erisken C, Kalyon D*, Wang H. A hybrid twin screw extrusion/electrospinning method to process nanoparticle-incorporated electrospun nanofibers. Nanotechnology 2008, 19: 165302.

C2. Erisken C, Kalyon D, Wang H. Nanocomposites for tissue engineering applications engineered using a novel twin screw extrusion and electrospinning process, AIChE Annual Meeting 2007, November 4-9, Salt Lake City, UT.

A2. Erisken C, Göçmez A, Yilmazer U, Pekel F, Özkar S*. Modeling and Rheology of HTPB Based Composite Solid-Propellants. Polymer Composites 1998, 19: 463-472.

A1. Göçmez A, Erisken C, Yilmazer U, Pekel F, Özkar S*. Mechanical and Burning Properties of Highly Loaded Composite Propellants. Journal of Applied Polymer Science 1998, 67: 1457-1464.

C1. Pekel F, Erisken C, Gocmez A, Ozkar S. Modeling and Rheology of Hydroxyl Terminated Polybutadiene Based Solid Propellants. 27 th. International Annual Conference of ICT, 25-28 June 1996, 49, 1-13 Karlsruhe, Federal Republic of Germany.